Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVSYH---EHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVP----QPFFFYGFLNRQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEI-LGD-REIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
| 1VA0 Chain:A ((1-225)) | --------------GRVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDR-LVDERVLALAPGE--KVYVGKEE--KQEEIHRLLLRHARAHPFVVRL-KGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS--GLPLTHRGLAHGFAAVSGVLEGGG--YPDLRPFA-RVPTLVVLMGVGRRVWIAKELLRLGRDPREPTLFVERASTPKERRVHARLEEVAEGKV--EVRPPALWILGEVVRVF----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132003 for 1770 contacts (-74.6/contact) +
2D Compatibility (PS) -22503 + (NN) -5137 + (LL) 6188
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -161455.0 ( -91.22 by residue)
QMean score : 0.352
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