Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVP----GCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE |
2AU3 Chain:A ((244-325)) | --EGFAILVEGYFDLLRLFSEGIRNVVAPLGTALTQNQANLLSKF--TKKVYILYDGDDAGRKAMKSAIPLLLSAGVEVYPVYLPE-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38325 for 509 contacts (-75.3/contact) +
2D Compatibility (PS) -8526 + (NN) -2010 + (LL) 7764
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -44047.0 ( -86.54 by residue)
QMean score : 0.445
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