Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRRRGVMSDEFKY---ELAKDLGFYD---TVKNGGW-GEIRARD--------AGNMVKRAIEIAEQQMAQNQNNR--------------------------------------------- |
| 1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10438 for 246 contacts (42.4/contact) +
2D Compatibility (PS) -5861 + (NN) 3595 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 3572.0 ( 14.52 by residue)
QMean score : 0.120
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