Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQV-EPIS--KLIQKGLTPEEILEEVL-GEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
1I7F Chain:A ((4-231)) | HDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPE-----NADLKTLVGN-GYVVITITPSEGERYQGVVGLEGDTLAADLEDYFMRSEQLPTRLFIRTG-D-VDGKPAAGGMLLQVMPAQN-AQQDDFDH-LATLTETIKTEELL--TLPANEVLWRLYHEEEVTVYDPQDVEFKCT------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1I7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81298 for 1581 contacts (-51.4/contact) +
2D Compatibility (PS) -23611 + (NN) -5615 + (LL) 4556
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -119018.0 ( -75.28 by residue)
QMean score : 0.444
|
|
|