Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFI----------LLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF---
4X1J Chain:A ((14-109))
--DKSAWCEAKNITQIVGHSGCEAKSIQNRACLGQCFSYSVPNTFVHCDSCMPAQSMWEIVTLEC--PGVDKLVEKILHCSCQACGK
General information:
TITO was launched using:
RESULT:
Template:
4X1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11953 for 360 contacts (-33.2/contact) +
2D Compatibility (PS) -7700 + (NN) -814 + (LL) 576
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -21391.0 ( -59.42 by residue)
QMean score : 0.124
(partial model without unconserved sides chains):
PDB file :
Tito_4X1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X1J-query.scw
PDB file :
Tito_Scwrl_4X1J.pdb
: