Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFPFLHDERDIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREE----EELRMEFFDYLY--NWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR--
4Q7O Chain:A ((4-136))
-----------------MKNNIFLNLNKKSINNN-HFVISIFFETIYQFE---TKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIA-HPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36797 for 878 contacts (-41.9/contact) +
2D Compatibility (PS) -13228 + (NN) -3170 + (LL) 2112
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -54183.0 ( -61.71 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: