Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYASFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGIIQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYAMLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNISSSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTDSDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAGAFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDSIVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLRTYQVKG---QIFFASVTDLTNAFIYQ---EDIERVVIDLTEAHVWDDSGAAALDKIVAKFKE-QGIEAELKGLNKASKSLMKQMA |
3T6O Chain:A ((11-101)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEAQVTVISFPAVFQRLRETEVEQIASTFLAAMQGAQPRKVLIDLEGVEFFGSSFIELLVRGWKRIKEDQQGVFALCSVSPYCVEVLQVTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26611 for 522 contacts (-51.0/contact) +
2D Compatibility (PS) -8653 + (NN) 318 + (LL) 34156
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -6990.0 ( -13.39 by residue)
QMean score : 0.634
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