Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MPLLTPTSVVLGVLL-----SQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGS----------GHLI---------------------------------FKGDPLTITGLTLAVVI------PTGITSLIWAAMYKGNVGLTLSIILVDTVL--------SPLIVPLSLSLLAGAQVHMDVWG--MMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAI-APYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFF---------------PSQVAVPVVIGMLFQQILAALFGYMLNRFELKPMLQKA |
| 4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDI-DYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310990 for 2467 contacts (-126.1/contact) +
2D Compatibility (PS) -30244 + (NN) -1724 + (LL) 248
1D Compatibility (HY) -26400 + (ID) 2650
Total energy: -371760.0 ( -150.69 by residue)
QMean score : 0.198
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