Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSG--KFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSH-I-S-SNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA--------AKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL--AQGGTAWSKVRFLKAAAEKLTQN |
| 3LHS Chain:A ((5-293)) | -----------------------------------ASTISVKDENGTVKVPKDAKRI-VVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFD-RNQKVLPAVVAKAGLLAHPNYSYVGQ-FLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKK--DSAEFKKLQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEM--AKELVELSKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40743 for 2312 contacts (-17.6/contact) +
2D Compatibility (PS) -30315 + (NN) -20614 + (LL) 3476
1D Compatibility (HY) -5600 + (ID) 2550
Total energy: -96346.0 ( -41.67 by residue)
QMean score : 0.498
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