Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEK-----AGKYYSQERDKTIEYLTK--IPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSA-------TDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTG---TVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 2QMI Chain:A ((4-332)) | -------------------------------------------------GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNV-------EARLPSTPETIYGIGSITKSFT-ALAIMKLVEEGGLSLDDPVEKFVNIKLRP------FGEPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEK-DKDVAMGY----ILDKE------------GRLV-PQP--FPYGITADGGLLSSVLDLAKYLKMYIERD----ESIVSKEYIEKMETSYIKVPWEIFGGEGYGYGLIIYPNF---------LGEKLVGHSGSVGMYTGYIGYIPEKKIGVAVLENSSGY---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91726 for 2644 contacts (-34.7/contact) +
2D Compatibility (PS) -33094 + (NN) -10305 + (LL) 8012
1D Compatibility (HY) -18800 + (ID) 3350
Total energy: -149263.0 ( -56.45 by residue)
QMean score : 0.472
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