Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRF-------TSL----PKEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLA--SYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRIGPLGEQLILHHFL
4E0A Chain:A ((1-152))
----MIIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHL-VQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAH--QVDAIELDVYDFNDRAKAFYHSLGMRCQKQTM--------------
General information:
TITO was launched using:
RESULT:
Template:
4E0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100522 for 943 contacts (-106.6/contact) +
2D Compatibility (PS) -15277 + (NN) -5135 + (LL) 1432
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -124052.0 ( -131.55 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_4E0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E0A-query.scw
PDB file :
Tito_Scwrl_4E0A.pdb
: