Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGGFSTPREPA-EIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAA-KTLAYAKEINASAVILKENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQ----------AGYRVISENELNDIL----------------------------- |
| 3LD1 Chain:A ((5-363)) | LRDVILVSKDIPEQLCDALFFYTSHNPKDYADAFAVRQKFDRNLQTGKQFKFETVCGLFLLKGVDKITPGVPAKVLKATSKLADLEDIFGVSPFARKYRELLKTACQWSLTVETLDARALTLDEIFDPTEILWLQVAAKIQVSAMAMRRLVGEVTAKVMDALGSNMSALFQIFKQQIVRIFQAALAIFENVSELPQRIAALKMAFAKCAKSITVVVMERTLVVREFAGTCLASINGAVAKFFE---ELPNGFMGAKIFTTFAFFREAAVKIVDNIPNAPRGTKGFEVVGNAKGTQVVVRGMRNDLTLLDQKAEIPVESEGWSAILGGHLCYVFKSGDRFYAAPLSGNFALHDVHCCERVVCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200 for 916 contacts (-0.2/contact) +
2D Compatibility (PS) -15280 + (NN) -13 + (LL) -96
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -21339.0 ( -23.30 by residue)
QMean score : 0.111
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