Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
2OQG Chain:A ((11-87))
--LASVFAALSDETRWEILTELG---------------RADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKVGREIRYRALGAELNKTAR------
General information:
TITO was launched using:
RESULT:
Template:
2OQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44987 for 507 contacts (-88.7/contact) +
2D Compatibility (PS) -8340 + (NN) -3299 + (LL) 1444
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -58182.0 ( -114.76 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2OQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQG-query.scw
PDB file :
Tito_Scwrl_2OQG.pdb
: