Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------MRFLKALPRRAEVQYDC-LDR------TLETQENVNLNIRVNVKEVATWGVNTCIISLKGLDNADDRFVLPEVNTALA-LFPLSIAADCLLMLPCISVVMSISSVMKSVTVE---
3CWX Chain:A ((47-176))
EVNPDIIKDEVFDFVIVNRVLKKI--KDLKHYDPMIEKIFEMGLNVEIQINPEVKDFFTFKSISTTNKQRCFLSLRG----ETREILCD-NKLYNMLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVY
General information:
TITO was launched using:
RESULT:
Template:
3CWX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43286 for 567 contacts (-76.3/contact) +
2D Compatibility (PS) -9564 + (NN) 3690 + (LL) 316
1D Compatibility (HY) -800 + (ID) 600
Total energy: -50244.0 ( -88.61 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_3CWX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CWX-query.scw
PDB file :
Tito_Scwrl_3CWX.pdb
: