Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------MKRNQKEWESVSKKGLMKPGGT-SIVKAAGCMGCWASKSIAMTRVCALPHPAMRAI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4AUI Chain:A ((20-327)) | DVTLYGTIKAGVETSRSVAHHGAQADRVKTATEIADLGSKIGFKGQEDLGNGLKAIWQLEQKAYVSGTDTGWGNRQSFIGLKGGFGKVRVGRLNNILKDTGNFNPWEGKSYYS-GLSNIAQPEERHVSVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYHAGFNYKNDGFFVQYAGSYKRHNYTTEKHQVHRLVGGYDHDALYASVAVQQQDAKLTWRDDNSHNSQTEVATTVAYRFGNVTPRVSYAHGFKGSVYDADHDNTYDQVVVGAEYDFSKRTSALVSAGWLQKGKGAEKFVATVGGVGLRHKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7833 for 247 contacts (31.7/contact) +
2D Compatibility (PS) -5144 + (NN) 2430 + (LL) 52
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 3021.0 ( 12.23 by residue)
QMean score : -0.016
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