Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGS-GKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSH-DDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADI-KELRGTHSIYLYQPDQIYKLSMEFMRKVR |
4CCW Chain:A ((31-292)) | -----------------------------------------RCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSS--TMWYPNIADWSSKYRTYAVDIIGDKNKSIPENLSGTRTDYANWLLDVFDNLGIE-KSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHD------FYKYALGLTASNGVEKFLNWMMT-----DQNVLHPIFVKQFQAGVMWQDGSRNP-NPKADGFPYVFTDEELRS-ARVPILLLLGEHEVIY-----DPHSAL-HRASSFVPDIEAEVIKNAGHVLSMEQPAYVNERVMRFFN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44736 for 2201 contacts (-20.3/contact) +
2D Compatibility (PS) -27050 + (NN) -460 + (LL) 6284
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -71162.0 ( -32.33 by residue)
QMean score : 0.387
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