Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 2LUW Chain:A ((16-88)) | ---------------------------------------------------------NKGSEVFYTFTVDRNATAVVSISG--GSGDADLYLKAGSKPTTSS-WDCR-PYRYGNNESCSV-SAAPGTTYHVMIKG------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7177 for 421 contacts (-17.0/contact) +
2D Compatibility (PS) -7765 + (NN) -2144 + (LL) 11924
1D Compatibility (HY) 0 + (ID) 400
Total energy: -5562.0 ( -13.21 by residue)
QMean score : 0.259
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