Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFG-KTHIIASGPKDAPSLILLHGGLFSSAMWYPNIAAWS-SQFRTYAVDIIGDKNKSIPSAAMETRADF-AEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYAAELTGARGAESYIKWITGDSYDLHPLLQRQIVAGVEWQDEQRSLKPTENGFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGGIK
1CR6 Chain:B ((239-367))-----------------------------------YVTVKPGIRLHFVEMG--SGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERV-RAVA-SLNTPFMPPDPDV-----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 606 -95660 -157.85 -759.20
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -157.85
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_1CR6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CR6-query.scw
PDB file : Tito_Scwrl_1CR6.pdb: