Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAYDSRFDEWVQKLKEESFQNNTFDRRKFIQGAGKIAGLSLGLTIAQSVGAFEVNAAPNFSSYPFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKPSLAHSVHVEADGLEPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFA-----SCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDG--YPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFE--------KTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFF--NDYRGYVRCTVTPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQTGLRKVSSTTIQGGVKQSDEVEEDRFFSHNKAHEKQMIKKRAKITN
4KBP Chain:A ((121-432))--------------------------------------------------------------------------------------------------------------------------------------------------------------------QTGLDVPYTFGLIGDLGQS--FDSNTTLSHYELS--PKKGQTVLFVGDLSYADRYPN--------------------HDNVRWDTWG-RFTE-RSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRA-----------------SAHIIVLSSYSAYGR----------------------GTPQYTWLKKELRKVKRS---------ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVD--VVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQ--PQP-EYSAFREAS---FGHGMFDIKNRT----HAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1745 -96758 -55.45 -327.99
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -55.45
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_4KBP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KBP-query.scw
PDB file : Tito_Scwrl_4KBP.pdb: