Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTISLAKGQKVDLTKTNPGLSKVVVGLGWDTNKYDGGHDFDLDSSVFLLDAAGKCASPNDFIFYNQLEGGNGSVVHSGDNLTGAGEGD-DENVKVNLSAVPANIDKISF--VITIHDAEARSQNFGQVSNAF-----VRIVNEETNEELIRYDLAEDFSIETAIIAGELYRHNGEWKFSAIGSGYQGGLARIATDYGLQVG
2BA1 Chain:A ((1-179))MRFVM-PGDRIG-----------------SAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESIS--PIPEIVKGDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIGDNLRLSTKEEEMGVLRALCSNCKTEMVREGD-ILKCPECGRVEKR-KISTDYGKGEW


General information:
TITO was launched using:
RESULT:

Template: 2BA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 774 -37490 -48.44 -219.24
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -48.44
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.229

(partial model without unconserved sides chains):
PDB file : Tito_2BA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BA1-query.scw
PDB file : Tito_Scwrl_2BA1.pdb: