Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVEVRNVSKQYGGKVVLEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRLIKKDSGEIYIDGQEIGACDSK--ELAKKMSILKQA--NQINIRLTIKDLVSFGRFPYSQGRLTEED-WVHINQALSYMKLEDIQDKYLDQLSGGQCQRAFIAMVIAQDTDYIFLDEPLNNLDMKHSVEIMKLLKRLVEELGKTIVIVIHDINFASVYSDYIVALKNGRIVKEGPPEEMI-ETSVLEEIYDMTIPIQTIDNQRIGVYFS
3GFO Chain:A ((20-246))------------GTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQD-VSFGAV---NMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKV-NLRLP--------------


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 997 -134624 -135.03 -609.16
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -135.03
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: