Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQQEQQQGGMKVKVQRFGSYLSGMIMPNIGAFIAWGIITALFIPAGWFPNEQLNTLVSPMITYLLPLLIAYTGGKMIYDHRGGVVGATAAIGVIVGSDIPMFLGAMIMGPLGGYLIKQTDKLFKDKVKQGFEMLINNFTAGIVGAALTILAFYAIGPVVLTLNKLLAAGVEVIVHANLLPVASVFVEPAKVLFLNNAINHGILSPIGIEQASQTGKSILFLVEANPGPGLGILLAYMFFGKGSSKSTAPGAAIIHFFGGIHEIYFPYILMKPALILAAIAGGASGLLTFTIFNAGLVAAASPGSIIALMAMTPRGGYFGVLAGVLVAAAVSFIVSAVILKSSKASEEDLAAATEKMQSMKGKKSQAAAALEAEQAKAEEASELSPESVNKIIFACDAGMGSSAMGASILRNKVKKAEL-DISVTNTAINNLP---SDADIVITHKDLTDRAKAKLPNATHISVDNFLNSPKYDELIEKLKK
3CZC Chain:A ((1-92))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVASNHLIHELDGR-TNGKLIGLDNLMDDNEIKTKLEEAL-


General information:
TITO was launched using:
RESULT:

Template: 3CZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 405 -49145 -121.34 -558.46
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -121.34
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_3CZC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CZC-query.scw
PDB file : Tito_Scwrl_3CZC.pdb: