Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSDGFKSLDEGQKVSFDVEQGARGAQAANVQKA
3PF4 Chain:B ((1-65))MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANVTK-


General information:
TITO was launched using:
RESULT:

Template: 3PF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 284 -27354 -96.32 -420.83
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.90

3D Compatibility (PKB) : -96.32
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3PF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PF4-query.scw
PDB file : Tito_Scwrl_3PF4.pdb: