Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVP-KGAMAFWEKRLEKFNVPYTK-IE----RFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD-FVRYRSAGDIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRN--YFNAIYFREHGEILFEIATDPPGFAHDETQETMGEKLMLPVQYEPHRTQIEQGLLPFEVRELD
3B59 Chain:A ((3-259))-LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDAN-------NAWFKAQ-G--ADEHHVVQLRR-----ADENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKR---DLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGDFMCFLRCNS-AHHRIAILP--------GPPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVDF-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1438 -129610 -90.13 -524.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -90.13
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_3B59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B59-query.scw
PDB file : Tito_Scwrl_3B59.pdb: