Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLGGIEAGGTKFVCAVGREDGTIIDRIEFPTK--MPDETIEKVIQYFS-------QFSLQAIGIGSFGPVDNDKTSQTYGTITATPKAGWRHYPFLQTVKNEMKIPVGFSTDVNAAALGEFLFGEAKGLDSCLYITIGTGIGAGAIVEGRLLQGLSH--PEMGHIYIRRHPDDVYQGKCPYHGDCFEGLASGPAIEARWGKK------AADL--------SDIAQVWELEGYYIAQALAQYILILAPKKIILGGGVMQQ-KQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQAEAASGEVRS
4IJA Chain:A ((95-391))YFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSILSIIKKHIDIQEKLDTYNGLLGVSVSIHGVVDNEQ-----HV-TY-------GISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKV-----SDNVE-IFHKIEDIFSQEALLHNLSNQLNEKMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYSR---N--------EIQIKLTSNVKFATLLGGTLAIIQKVLQINDI-----


General information:
TITO was launched using:
RESULT:

Template: 4IJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1326 -171005 -128.96 -647.75
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -128.96
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_4IJA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IJA-query.scw
PDB file : Tito_Scwrl_4IJA.pdb: