Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIVALHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKRAGLDYWEFVNVVYHDSLEELF--EAYKKGKFFFITKFGQQPHTSFDYTDLDEDYFFVFGRETSGLPKDLIQN-NMDRCLRLPMTEHVRSLNLSNTAAILVYEALRQQNYRDLK
4KGN Chain:F ((6-156))-----FNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEAPDPARMFAFTTRGS---GRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAGF----


General information:
TITO was launched using:
RESULT:

Template: 4KGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 647 -102726 -158.77 -694.09
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain F : 0.81

3D Compatibility (PKB) : -158.77
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_4KGN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KGN-query.scw
PDB file : Tito_Scwrl_4KGN.pdb: