Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDYADYDKALYYTHRSQWDNLLILMVR-TE-DDL-LSKRIEHFLHAYHFEQDYAVLEKMLYSLLRYI-DHATELTYEDQIALLT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4YCZ Chain:B ((314-1176))SEYRYAALAKDAYQQMGTAPVTEPPQVILGTEDLLSRLYDEKMDDTLATAAAQLAALWREHVDETPFEKANYLANLALQIHHPLPQTLFRWLNEYHMYGSQVDDILRHRPSPACHSLFWQAVFIALKVGDAARLLDQAGWGHVYAYVNVQRAVDETIAVLESCPTLFRVRARGLLEHLRRFAEGWEIYENLNIVFDIVLGQQGAILEAAQDWLEATVGLANSESYLDRLARAFHTAVESDFVEIGMACVFEDNIKGVIGLLRGWSLPIAAAVAEIASLGKWLEVDGIKDSTLVQYAQALADYEGLSSVQDRDGWELSISVLGRMPERSEEMVRDLVEHLVQQLHVD-SNATVDRLWFLLNELGMIEFAEDTTETYGDILARDSHRYGEAMWYYALAHRPNKVREVMNLLTSYSLIQPPANDLDDYLYKLLNDRKNTLEQCASQDMEAAELLGKMLSGYASLRQFYDIRPHATPLSRRKQAATALISVIASSDDEDFLLALLGEALVFVSDPTLDQIDVLLKAIEDLQAVGSRVYNACDEFLQLVLASAPGGSSLVASQLQRSLSGTGGEDIMRRLRLGLAKDLAGLWLAEA


General information:
TITO was launched using:
RESULT:

Template: 4YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 229 8642 37.74 109.39
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.52

3D Compatibility (PKB) : 37.74
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.195

(partial model without unconserved sides chains):
PDB file : Tito_4YCZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YCZ-query.scw
PDB file : Tito_Scwrl_4YCZ.pdb: