Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDRG-RIDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
2AI8 Chain:C ((1-147))-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 2AI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 732 -67897 -92.75 -468.25
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.82

3D Compatibility (PKB) : -92.75
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2AI8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AI8-query.scw
PDB file : Tito_Scwrl_2AI8.pdb: