Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFYTIKLPKFLGGIVRAMLGSFRKD
3BYA Chain:B ((1-20))------KKKATFRAITSTLASSFKRR


General information:
TITO was launched using:
RESULT:

Template: 3BYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 3 -2 -0.67 -0.10
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -0.67
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.338

(partial model without unconserved sides chains):
PDB file : Tito_3BYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BYA-query.scw
PDB file : Tito_Scwrl_3BYA.pdb: