Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGKKKESGKFRSVLLIIILPLMFLLIAGGIVLWAAGINVLKPIQDAAAKTPVLKELVPETENKKGAASSKDSSNTAALEKTIKDQKSEISILNKDLETSKSEIDRLNQKIRSLEKTAEDQKKSSEDHTEGSADSKASSENDKVISVYKSMDSGKAAKIIAQLKEQEALKILNGLSKKQLADILAKMTPEQAATYTEKIAASQE
2YVY Chain:A ((34-91))---------------------------------------------------------------------------------------------------------------------------------------------QDLLALWDELKGEHRYVVLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEEL-----


General information:
TITO was launched using:
RESULT:

Template: 2YVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 148 -28641 -193.52 -493.80
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -193.52
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.914

(partial model without unconserved sides chains):
PDB file : Tito_2YVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YVY-query.scw
PDB file : Tito_Scwrl_2YVY.pdb: