Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKIFIDPGHGGSDPGATG--NG-LQEKTLTLQIALALRTILTNEYEGVSL--LLSRTSDQ---YVSLNDRTNAANNWGADFFLSIHVNSG--GGTGFESYIYPDVGAPTTTYQSTIHSEVIQAVDFADRGKKT-ANFHVLRESAMPALLTENGFIDTVSDANKLKTSSFIQSLARGHANGLEQAFNLKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDAIVILES
3QAY Chain:A ((2-179))-MKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRK-E-GHKVDVIICPEKQFKTKNEEKSYKIPRVNSGGYDLLIELHLNASNGQGKGSEVLYYSNK---GLEYATRICDKLGT--VFKNRGAKLDKRLYILNSSKPTAVLIESFFCDNKEDYDKAKK-LGHEGIAKLIVEGVLNKNI-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3QAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 899 -75791 -84.31 -453.84
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -84.31
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_3QAY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QAY-query.scw
PDB file : Tito_Scwrl_3QAY.pdb: