Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRFILVLSFLSIIVAYPIQTNASPMPCSVILEPVDKNLKNAKGVALIYKVQLNPPSAARTNISILAVHLPAPSSFGNYDSYEGFATKPGEISWRFKLYPTPEEESPSWAGRIDT-ISAEMKNVKVQVRLSNSSTQKLGPSILTKNIESCY
2MQ8 Chain:A ((1-112))-----------MLTVEVEVKITADD-------ENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRD---------------------DGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2MQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 464 549 1.18 4.94
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 1.18
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.191

(partial model without unconserved sides chains):
PDB file : Tito_2MQ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MQ8-query.scw
PDB file : Tito_Scwrl_2MQ8.pdb: