Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MNTAYRVWDGEQMHYWDDEGLSLIIKSNGDWTLKRLYTDVLVPVVDSTNRNAALMWGAKVRGKFIYDRSIVKITSDDKESSDV-CEVKFSDGVFQVDVSKISADYDVT--AV-GWVEYATIEVIGDVYQNPELLEGVK
2WQ4 Chain:A ((2-135))PLLSASIVSAPVVTSETYVDIPGLYLDVAKAGI-RDGKLQVILNVPTPYATGNNFPGIYFAIATNQGVVADGCFTYSSKVPESTGRMPFTLVATIDVGSGVTFVKGQWKSVRGSAMHIDSYASLSAIWGTAAPSS------


General information:
TITO was launched using:
RESULT:

Template: 2WQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 692 -849 -1.23 -6.68
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -1.23
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.051

(partial model without unconserved sides chains):
PDB file : Tito_2WQ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WQ4-query.scw
PDB file : Tito_Scwrl_2WQ4.pdb: