Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEIAEVLPESMKNALSEIPEQQWLEIEEVRIRINRPVELIRRGQPVYLS--YAGTAEDAHLILSRL-SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAEPLLPYLYQN-SWLNTLIIGPPQTGKTTLLRD-LARLSSTGKKNMLPV----------KTGIVDER------SEIAGCLRGIPQH-----QFGQ-R-----IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRM--EDTDALLEALHAGVSVIVSAHGW------------------SISDLMKRPSLKRLWEE-R-AF-DRYLELSRAKGPGTVSQIYDKDG-NVLSRTTGVKTC
2GSZ Chain:A ((1-349))ELKILEIIKEAIELGAS-----------DIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPE--FKKLGLPDKVLELCHRKMGLI--LVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLMQMQTMNQTLYKLYKQGL-----ITLEDAMEASPDPKELER-


General information:
TITO was launched using:
RESULT:

Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1430 30022 20.99 104.97
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 20.99
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_2GSZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GSZ-query.scw
PDB file : Tito_Scwrl_2GSZ.pdb: