Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTFYDVQQLLKTFG----HIVYFGDRELEIEFMLDELKELYMNHMIEKEQWARAAAVLRKELEQTKNGRDFYKG
3DNP Chain:A ((207-236))------LALVASELGLSMDDVVAIGHQYDDLPMIEL---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 30 -3934 -131.12 -151.29
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -131.12
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3DNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DNP-query.scw
PDB file : Tito_Scwrl_3DNP.pdb: