Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MIDTAMARLNEGTIVIYALSVLFYF------IDF----LQHNRKAGKMAFWLLSIVWTLQTVYLAYFMWVTGRFPVLNVTEALYFYAWVLVTLSLVLTKLLRVDFIVFFTNVIGFSMIAIHT--------FSPTEQQSAAFSGQLVSELLVIHITMAILSYGAFSLSFVFSVLYMFQYHLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSLILGVIWAYVSLETLYW----FDAKVLGSFVVLLLYSYYLYIRLIKELQGKVAALWNTACFLVLMINYFLLGSLSQFHWFS
4XB6 Chain:D ((2-278))ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSP------IPKFDNPKMDMMP-ALQLFGAGR---EKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGN---------RMFVCSDTDYCRQQSEA----


General information:
TITO was launched using:
RESULT:

Template: 4XB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1319 -68858 -52.20 -272.17
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : -52.20
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.207

(partial model without unconserved sides chains):
PDB file : Tito_4XB6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XB6-query.scw
PDB file : Tito_Scwrl_4XB6.pdb: