Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALNTRESARDITALDIPDTSASNTFEIGFVTENVEAVIKRMREQGVSIIGEP---KVKPWGQTVAYIADPDGHYIEICSPME
4KYH Chain:B ((127-177))--------------------------HIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK----GLAFIQDPDGYWIEILNP--


General information:
TITO was launched using:
RESULT:

Template: 4KYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 150 125 0.83 2.59
target 2D structure prediction score : 0.90
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : 0.83
2D Compatibility (Sec. Struct. Predict.) : 0.90
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.851

(partial model without unconserved sides chains):
PDB file : Tito_4KYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KYH-query.scw
PDB file : Tito_Scwrl_4KYH.pdb: