Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------MQKDHVGAVYELLNEAAIMIKN------ELQISYIEALAEAGEMY---------FLEKTDQLKLPAD------------------QKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPDTIGLFISYLVNKFMADKKELTILDPALGTGNLLFTVLNQL-----SEKTANSF------GIEIDDVLLKIAYAQANLLKKEL-ELFHQDSLEPLFI-----DPVDTVICDLPVGYYPNDEGAEAF--ELKADEGHSFAHHLFIEQSVKH---TKPGGYLFFMIPNHLFESS-QSGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGENTKAPGQILL---ANLPSFSNQKAM-LDMMAQFDEWFKKEK----------------------------------------
3UFB Chain:A ((12-495))ADQPMTTAQQLGAIVKSSRQIMRKDKGLNGDLDRLPMLTWIMFLKFLDDLEQMRETEAVLEGKSFQPAIEAPYRWRDWAAIEGGITGDELIAFINNDEAMRPDGTRGIGLFAYLRSLQGDNGGDRRDVIATVFKGMQNRMINGYLLRDVVDKINGIHFNSSEEMHTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGPTDDIWYYQITVPEGRKKYTKTKPMESHEFDECLNWWSNRIVNQNAWKESASEIIKYSESGQLIDVNLDRKNPNSLEVLEH


General information:
TITO was launched using:
RESULT:

Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1556 44677 28.71 135.79
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 28.71
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_3UFB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UFB-query.scw
PDB file : Tito_Scwrl_3UFB.pdb: