Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------------------------------MKMTSRKLSDILKQRLQ-HENRSFLFDREKD---TLRVEDQ------TTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYA---LDLGKTYRLIDQRMLEKENW-TKERIRETAAF---------------------NLRS-----LPTVVKED---------------TVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLI---------LADIRNESGYD--------ILGQMSMSFFAGGTVPITALSFLYNEGKLEPVFILAKSRPKKD---------------- 1Q9J Chain:A ((1-418)) MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG

General information: TITO was launched using: RESULT: Template: 1Q9J.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1083 12995 12.00 48.31 target 2D structure prediction score : 0.51 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : 12.00 2D Compatibility (Sec. Struct. Predict.) : 0.51 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.227

(partial model without unconserved sides chains): PDB file : Tito_1Q9J.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1Q9J-query.scw PDB file : Tito_Scwrl_1Q9J.pdb: