Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKRFSKRLFWPLFIGGLVLLFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEELEKEYKSVSSEAKKLKDNKEDQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLKETESQTASSHEDTGSSSNNTSKSDETKTADKAEGCNIKGSRNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGYRAPKR
4PXJ Chain:C ((4-57))------------------------------------------------------------------------------------------------------------------------DPEFTKNALNVVKNDLIAKVDQLSGEQEVLRGELEAAKQAKVKLENRIKELEEE--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 6 669 111.42 12.38
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain C : 0.60

3D Compatibility (PKB) : 111.42
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.875

(partial model without unconserved sides chains):
PDB file : Tito_4PXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PXJ-query.scw
PDB file : Tito_Scwrl_4PXJ.pdb: