Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MYFVDRSKIEKT--------LGFFEHQLALFDSQT-----DWQSEIGELALQR-------IGHLLIECILDTGNDMIDGFIMRDPGSYDDIMDILVDEKVVTEKEGDELKKLIAYRKTLVQQY----LLADSGELYRLIKAHQTA---LQDFPKRIRSYLETELGPVSAFK
5HM2 Chain:A ((7-207))DLQKMVMANVKPVELILDGKTVALCCATGVFGTAYLVPRHLFAEKYDKVVLDGRQLDNSDFRVFEFEVKVKGQDMMSDAALMVLNRGQRVRDITMHFRDQVHIKKGTPVLGVINNADVGRLIFSGDALTYKDVVVAMDGDTMPGLFAYRAGTKVGYAGGAVMTKDGAHTVIIGTHSAGGNGVGYCSCVSRSSLLQLKAHID---


General information:
TITO was launched using:
RESULT:

Template: 5HM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 523 -5501 -10.52 -39.01
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -10.52
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.61
QMean score : -0.033

(partial model without unconserved sides chains):
PDB file : Tito_5HM2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HM2-query.scw
PDB file : Tito_Scwrl_5HM2.pdb: