Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENLFSEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
1OGD Chain:D ((1-131))MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQENAKFLENLFSEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF


General information:
TITO was launched using:
RESULT:

Template: 1OGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 630 -68790 -109.19 -525.11
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain D : 1.00

3D Compatibility (PKB) : -109.19
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 1.00
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_1OGD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OGD-query.scw
PDB file : Tito_Scwrl_1OGD.pdb: