Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEI--EADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTVRFMDPKPREKAAD
2VW9 Chain:B ((1-106))MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMD---------


General information:
TITO was launched using:
RESULT:

Template: 2VW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 420 -23652 -56.31 -227.42
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -56.31
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2VW9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VW9-query.scw
PDB file : Tito_Scwrl_2VW9.pdb: