Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFARDIGIDLGTANVL-IHVK-GK-GIV------LNEPSVVALDKNSGKVLAVGEEARRMVGRTPGNIVAI--------------------RPLK-----DGVI---A------DFEVTEAMLKHFINKLNVK---GLFSKP-RMLICCPTNITSVEQKAIKEAAEKSGGKHVYLEEEPKVAAIGAGMEIF-------QPSGNMVVDIGGGTTDIAVISM--GDI--VT-SSSIKMAGDKFDMEILNYIKREYKLLIG-------------ERTAEDIKIKVATVFPDARHEEISIRGRDMVSGLPRTITVNSKEVEEALRESVAVIVQAAKQVLERTPPELSADIIDRGVIITGGGALLNGLDQLLAEELKVPVLVAENPMDCVAIGTGVMLDNMDKLPKRKLS
3D2F Chain:A ((2-390))--STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGP---KNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNA------PFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLS--A-EEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHS--------


General information:
TITO was launched using:
RESULT:

Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1585 31534 19.89 101.39
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 19.89
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_3D2F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D2F-query.scw
PDB file : Tito_Scwrl_3D2F.pdb: