Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPDALSPRVTAGLETVAIRMPDHPLALALIRESGLP-IAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGGP-TGIGVESTVLSCADDIPVLLRPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAICEGSPERIQHLIQEYQQGGRRVGVLTTEEKAGVYSADYVKSCGRRAQLETVAAGLYDALRSFDENKVDFIIAESFPDTGVGLAIMNRLMKAAGGRVIR
4G9I Chain:A ((200-390))-----------------GDPLRKAAELIDKGYIVAIKGIGGIHLACDAANEEVVAELRRRTFRP-QKPFAIMAKDIETVKSFAY-VSPEEEEELT-SYRRPIITLRKKEPFPLPENLAPGLHTIGVMLPYAGTHYILFHWSKTPVYVMTSANYPGMPMVKDNERAFEELKDVADYFLLHNRKILNRADDSVIRFVDGKRAVIRRSRGFVPL-----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4G9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 965 -81662 -84.62 -432.07
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -84.62
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_4G9I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G9I-query.scw
PDB file : Tito_Scwrl_4G9I.pdb: