Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS-PASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2QQE Chain:B ((2-174))------SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-----------------VEAHVIERPEEMRKYIEEDTRGVFIDEVQFFNPSLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVA-----------IDVGGQEKYIAVCR-----------


General information:
TITO was launched using:
RESULT:

Template: 2QQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 741 -97095 -131.03 -647.30
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -131.03
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_2QQE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QQE-query.scw
PDB file : Tito_Scwrl_2QQE.pdb: