Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSG-------GLLILSRWDLGTDPVEVLDALTAAGYAGRGQR-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4U1F Chain:A ((146-625)) | PSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGI-----RDFSFAPEGVKLQPFRNGDEPS--VLLAYWTPETNNSACTATIAEVPRG---RVLKTVNLVQVSNVTLHWQN---QAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVELKDSVFEFGWEPHGNRFVTISVHEVADMNYAIPANTIRFYAPETKKRWSLVKEIPKTFANTVSWSPAGRFVVVGALVGPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLVKEDIIAGFKNFAWRPRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73704 for 836 contacts (-88.2/contact) +
2D Compatibility (PS) -13464 + (NN) 1216 + (LL) 880
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -89022.0 ( -106.49 by residue)
QMean score : 0.111
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