Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVA-CLGDTAAAADGTMTVTLEDVL--SNTDGQVIAVYRLRAS--RAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
3GRD Chain:A ((2-134))
-MPKANLEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLGSEWN-DYKASVNMYHEVSGK-DVIIAEGMYSGVYKDTGKSFEAEFVHVWQLENGKIVKFKQYVDSHLVREAMKS
General information:
TITO was launched using:
RESULT:
Template:
3GRD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67310 for 898 contacts (-75.0/contact) +
2D Compatibility (PS) -13860 + (NN) -3878 + (LL) -40
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -92438.0 ( -102.94 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3GRD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GRD-query.scw
PDB file :
Tito_Scwrl_3GRD.pdb
: