Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
2KJE Chain:B ((1-42))
-----------------------SHMAPEDPNEEAVSQIFPDSVMLAVQEGIDLLTFPPAPGSPE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4268 for 143 contacts (-29.8/contact) +
2D Compatibility (PS) -4350 + (NN) -2113 + (LL) 6440
1D Compatibility (HY) 400 + (ID) 500
Total energy: -4391.0 ( -30.71 by residue)
QMean score : -0.341
(partial model without unconserved sides chains):
PDB file :
Tito_2KJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJE-query.scw
PDB file :
Tito_Scwrl_2KJE.pdb
: