Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKL----------------NPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT-AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR
1Z69 Chain:A ((1-207))
----------MKFGIEFVPSD--PALKIAYYAKLSEQQGFDHVWITDHYN---------NRDVYSTLTVLALNTNSIKIGPGVTNSYTRNPAITASSIASIAEISGGRAVLGLGPGD-KATFDAMGIAWK---KPLATTKEAIQAIRDFISGKKVSMDGEMIKFAGAKLAFKA-GNIPIYMGAQGPK-MLELAGEIADGVLINASHPKDFEVAVEQIKKGAEKAGRDPSEVDVT-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113570 for 1504 contacts (-75.5/contact) +
2D Compatibility (PS) -20869 + (NN) -11003 + (LL) 2448
1D Compatibility (HY) -6000 + (ID) 2250
Total energy: -151244.0 ( -100.56 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1Z69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z69-query.scw
PDB file :
Tito_Scwrl_1Z69.pdb
: